When a Auto-processing transaction is run on the non-default processor and the transaction fails, the offsetting transaction is shown with the Default processor in the Gift Types section. This is causing querying based on the Processor to not pull the offsetting transaction.
We are currently evaluating this issue and will update this article when we have more information.
If this is causing incorrect results in queries, include the criteria "Transaction Reversal Status" and mark the option for Non-Reversed. This will take out any reversed transaction, which should not be included in a query on received transactions anyway.